BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007A08LP1|AL425622
(766 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1478 534 e-151
>3x_Contig1478
Length = 9651
Score = 534 bits (269), Expect = e-151
Identities = 282/285 (98%), Gaps = 1/285 (0%)
Strand = Plus / Minus
Query: 3 cataagttggccaatataaaccctcccgtcatgggtagcgactcgtattctataatctat 62
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 287 cataagttggccaatataaacccttccgtcatgggtagcgactcgtattctataatctat 228
Query: 63 caaatctgatagcttcgtttccttctttttaacttcaacttgcgacatcgtccttgtatc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 caaatctgatagcttcgtttccttctttttaacttcaacttgcgacatcgtccttgtatc 168
Query: 123 ttttgtatgatatgcttagagatataactattcttcttggtgaacaaagaaagtgaaaaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ttttgtatgatatgcttagagatataactattcttcttggtgaacaaagaaagtgaaaaa 108
Query: 183 gactgtaaactcgattgtaagaggtatccttatatcatgcacaaaaaagcggtccgtagc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gactgtaaactcgattgtaagaggtatccttatatcatgcacaaaaaagcggtccgtagc 48
Query: 243 agtcattctttataggaccaacgcaagttactcattgatcgtgaa 287
||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 47 agtgattctttatagg-ccaacgcaagttactcattgatcgtgaa 4
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8030
Number of Sequences: 1807
Number of extensions: 8030
Number of successful extensions: 70
Number of sequences better than 1.0e-20: 1
length of query: 766
length of database: 10,358,551
effective HSP length: 16
effective length of query: 750
effective length of database: 10,329,639
effective search space: 7747229250
effective search space used: 7747229250
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)